#accession, length, span(s), M/X, apparent source # X: exclude the whole screened span; in AGP file - replace component line with gap line # M: trim part of the screened span; in AGP file - edit component line, add gap line AC147791.1 167209 166840..167209 M vector AC182482.3 201039 1..2121 X Escherichia coli AC182482.3 201039 5040..7481 X Escherichia coli AC182828.4 189976 134688..136774 X Escherichia coli AC182828.4 189976 182573..184652 X Escherichia coli AC183521.2 201317 1585..3941 X Escherichia coli AC183521.2 201317 4042..7006 X Escherichia coli AC183911.4 127879 3173..127879 X (EXCLUDE?); mitochondrion AC183926.3 139149 2530..3004 M Escherichia coli AC184113.4 130648 125165..125260 M vector AC185322.3 195950 169525..172305 X Escherichia coli AC185461.4 166639 36503..134023 X mitochondrion AC185596.3 197346 141121..143951 X Escherichia coli AC185596.3 197346 185232..189606 X Escherichia coli AC186330.4 166662 160766..163600 X Escherichia coli AC186566.5 163192 1..2193 X Escherichia coli AC186566.5 163192 2294..4407 X Escherichia coli AC186566.5 163192 4508..6782 X Escherichia coli AC186782.4 216662 209567..216662 X mitochondrion AC186782.4 216662 23255..32646 X mitochondrion AC186905.3 224411 176906..224411 X mitochondrion AC187208.2 69501 1..2060 X Escherichia coli AC187208.2 69501 12501..16341 X Escherichia coli AC187208.2 69501 16442..19038 X Escherichia coli AC187224.4 162555 1..4366 X Escherichia coli AC187224.4 162555 146841..149580 X Escherichia coli AC187244.4 198567 6432..7494 M Escherichia coli AC187397.2 130076 1..2596 X Escherichia coli AC187397.2 130076 43434..102554 X mitochondrion AC187467.3 145132 1..83873 X mitochondrion AC189063.3 171461 62270..62537 M Escherichia coli AC189742.3 152068 107929..108730 M Escherichia coli AC194080.2 185157 15486..20754 X Escherichia coli AC194080.2 185157 25227..33488 X Escherichia coli AC194100.2 152186 10454..16071 X Escherichia coli AC194100.2 152186 2326..5140 X Escherichia coli AC194100.2 152186 5241..10353 X Escherichia coli AC194216.3 101512 1..62 M Escherichia coli AC194291.3 183727 158349..183727 X mitochondrion AC194905.2 157660 1..2093 X Escherichia coli AC194934.3 133166 27542..28263 M Escherichia coli AC195936.1 137547 8590..10618 X Escherichia coli AC196008.2 202602 9770..11842 X Escherichia coli AC196478.2 183250 180945..183250 X Escherichia coli AC196491.2 202950 1..2135 X Escherichia coli AC199153.3 130854 47189..73907 X mitochondrion AC199153.3 130854 82702..122013 X mitochondrion AC199343.4 191117 167732..172024 M Escherichia coli AC200670.3 213537 69839..70195 M Escherichia coli AC202971.2 183137 87729..88012 M Escherichia coli AC203006.3 183962 1..2226 X Escherichia coli AC204598.3 153563 147013..147083 M Escherichia coli AC205123.3 178832 28116..35247 X mitochondrion AC205155.3 176868 107443..107538 M vector AC205155.3 176868 107639..107740 M vector AC205155.3 176868 176774..176868 M vector AC205667.3 182492 182263..182477 M Escherichia coli AC205721.3 200458 159082..161299 X mitochondrion AC205970.3 110962 24743..24845 M vector AC205970.3 110962 24946..25040 M vector AC206267.3 183127 39262..40112 M Escherichia coli AC208415.3 190822 43871..44670 M Escherichia coli AC209386.3 188543 1..2411 X Escherichia coli AC209974.4 205852 198965..205852 X mitochondrion AC212562.4 188473 139821..140144 M Escherichia coli AC213640.3 181502 164953..165069 M Escherichia coli AC214483.3 211499 205738..207755 X Escherichia coli AC214535.3 169340 1..399 M Escherichia coli AC214770.4 199941 128087..131145 X mitochondrion AC214837.4 196321 144217..188820 X mitochondrion AC217656.3 168565 1..102 M vector AC226320.1 195878 50896..54925 X Escherichia coli AC226606.2 111845 1..2334 X Escherichia coli AC232231.2 121269 1..2478 X Escherichia coli AC233856.1 195373 21965..22632 M Escherichia coli AC177854.5 143524 96342..96477 M IS10 AC177910.2 178170 5479..5505 M IS1 AC184703.5 236610 107266..107431 M IS10 AC185599.3 133307 1894..1949 M IS10 AC185616.3 148611 53375..54569 M IS5 AC186604.4 210195 112419..112747 M IS10 AC187158.4 175884 7449..8161 M IS10 AC187224.4 162555 162192..162555 M IS10 AC187481.4 204507 130681..132009 M IS10 AC187788.3 202205 182556..182726 M IS2 AC188134.3 189714 100351..100908 M IS10 AC188744.3 182725 46848..47478 M IS1 AC188746.2 181512 15399..16736 M IS10 AC188962.3 177851 39249..39706 M IS10 AC189063.3 171461 3046..3174 M IS2 AC189078.3 198133 136656..137979 M IS2 AC191254.3 155069 65924..66562 M IS10 AC191259.2 192148 6990..7620 M IS1 AC191314.2 178672 971..1117 M IS1 AC191342.2 150879 130524..130633 M IS10 AC191412.3 171355 40036..40137 M IS5 AC191528.3 141923 73745..73883 M IS10 AC191540.3 180667 85990..86290 M IS10 AC191929.3 145696 80101..80240 M IS2 AC193315.3 157563 45537..45799 M IS2 AC193469.2 180829 18628..18874 M IS1 AC193531.3 167930 119874..120183 M IS5 AC193587.3 186920 128340..129567 M IS10 AC195479.3 148032 71952..72043 M IS3 AC195552.3 190595 175260..175844 M IS10 AC195880.3 145773 17253..17290 M IS10 AC196003.2 188784 25001..26339 M IS10 AC197032.3 182610 15144..15209 M IS10 AC197049.3 206844 178336..178420 M IS10 AC197185.2 126768 5052..6389 M IS10 AC197229.3 146960 6099..6329 M IS10 AC197245.1 194400 164768..166105 M IS10 AC197495.2 152800 102436..102656 M IS10 AC197769.3 194528 35032..35209 M IS10 AC197784.3 180758 156026..156261 M IS186 AC198649.3 207894 107462..108799 M IS10 AC199910.4 154190 125457..125660 M IS150 AC200116.4 152079 127150..127290 M IS2 AC200202.2 190453 140331..140389 M IS1 AC202884.3 192874 136608..136886 M IS10 AC203180.3 168021 147065..147112 M IS10 AC203791.3 184693 56959..57132 M IS10 AC203828.3 146572 45..718 M IS10 AC204296.3 167954 81954..82013 M IS10 AC204406.3 206926 42642..42695 M IS1 AC204575.3 192954 87365..87566 M IS2 AC205129.3 203977 42840..43944 M IS10 AC205515.3 209978 68266..68413 M IS10 AC206650.4 142399 56348..56398 M IS3 AC206679.3 163653 138273..138471 M IS186 AC206775.3 188893 34230..34822 M IS10 AC207282.3 169448 10026..10714 M IS10 AC207878.3 190803 179035..179642 M IS10 AC209074.3 176850 111652..111785 M IS10 AC209445.3 118639 56814..57002 M IS2 AC209879.3 158556 95397..95477 M IS186 AC210029.3 184095 62587..62760 M IS2 AC210030.4 196157 172799..173119 M IS10 AC210173.4 165618 81649..81723 M IS1 AC212323.4 185467 20767..20952 M IS186 AC212407.3 196747 24188..24477 M IS2 AC212737.3 200885 144881..145095 M IS10 AC212742.3 210956 63994..64038 M IS186 AC214000.3 139478 35675..36046 M IS10 AC214830.2 160707 106529..107877 M IS186 AC215249.3 204058 80412..80715 M IS10 AC216056.3 249611 208114..208219 M IS2 AC216196.3 190283 136142..136314 M IS2 AC217358.3 122683 108029..108472 M IS10 AC217908.3 213060 120634..120794 M IS10 AC218979.3 186988 119463..119848 M IS1 AC220970.4 201592 45032..45164 M IS150 AC225146.1 28403 5487..6822 M IS2 AC225188.3 155562 122121..122296 M IS150 AC231418.3 206962 169905..170165 M IS2 AC233851.2 229477 3961..4407 M IS10 AC234184.2 176444 28916..29331 M IS150 AC184864.4 196206 190307..192575 X Bacillus cereus Q1 AC187241.4 219594 216337..219594 X Gallus gallus AC187835.4 130675 130312..130675 X Macaca mulatta AC191015.2 199267 197217..199267 X Bacillus cereus Q1 AC208605.2 217798 14585..19733 X Staphylococcus aureus AC186330.4 166662 164577..166662 M (Escherichia coli) AC210957.4 191711 188632..189362 M (Escherichia coli) AC206029.2 161745 2102..2811 M (Escherichia coli) AC187208.2 69501 21344..22176 M (Escherichia coli) AC205698.3 140008 138007..138516 M (Escherichia coli) AC225335.3 163074 162781..163074 M (vector) AC233856.1 195373 55218..56300 M (Escherichia coli) AC182482.3 201039 17113..17713 M (IS10) AC204060.3 156424 34664..35152 M (Escherichia coli) AC205573.3 197528 993..1482 M (Escherichia coli) AC191040.2 185231 69774..70728 M (Escherichia coli) AC214255.3 195447 195182..195447 M (Escherichia coli) AC231737.1 139051 3471..3894 M (IS2) AC187252.5 183313 154449..154714 M (Escherichia coli) AC207323.3 205399 205176..205399 M (Escherichia coli) AC215927.2 182783 102525..102771 M (Escherichia coli) AC211269.3 192607 1..1274 M (Escherichia coli) AC193005.2 139625 9649..10457 M (Escherichia coli) AC202405.3 173792 7760..8511 M (Escherichia coli) AC184860.3 194631 71957..72274 M (Escherichia coli) AC202971.2 183137 63230..64011 M (Escherichia coli) AC201889.3 179574 49674..50200 M (Escherichia coli) AC177897.2 318006 2743..2960 M (vector) AC231748.4 199384 128549..129353 M (Escherichia coli) AC217648.3 152457 144042..144263 M (Escherichia coli) AC205662.4 154724 219..560 M (Escherichia coli) AC211407.4 217614 7980..8272 M (Escherichia coli) AC194087.3 193216 17143..17558 M (Escherichia coli) AC198903.2 162196 161695..162196 M (Escherichia coli) AC191274.2 168899 53890..54576 M (Escherichia coli) AC187792.3 165368 18391..19384 M (Escherichia coli) AC195669.3 108656 99809..100058 M (Escherichia coli) AC194009.4 212157 157184..157397 M (Escherichia coli) AC234154.2 202880 8948..9381 M (Escherichia coli) AC182482.3 201039 13057..13215 M (IS10) AC205853.3 161802 22928..23127 M (Escherichia coli) AC211182.3 185207 55213..55950 M (Escherichia coli) AC207245.3 154366 136867..137227 M (IS10) AC207458.3 206873 66128..66380 M (Escherichia coli) AC199920.4 159250 21032..21331 M (Escherichia coli) AC205837.3 166443 20693..21057 M (Escherichia coli) AC186232.3 144228 14952..15325 M (Escherichia coli) AC203675.3 188787 175286..175727 M (IS10) AC191576.2 184979 32041..32453 M (IS10) AC212821.4 154829 139642..140056 M (IS10) AC213311.3 217461 145874..146590 M (IS10) AC195918.2 124516 1..866 M (Escherichia coli) AC215170.3 195882 120684..120775 M (IS10) AC195180.1 90221 32684..33281 M (Escherichia coli) AC208436.3 158762 97887..98024 M (Escherichia coli) AC198213.4 174599 89020..89694 M (Escherichia coli) AC210951.4 226254 191531..191768 M (Escherichia coli) AC210956.4 227795 16189..16527 M (Escherichia coli) AC208513.3 212376 212198..212376 M (Escherichia coli) AC194336.3 143284 13093..13428 M (Escherichia coli) AC212049.4 160239 34074..34527 M (Escherichia coli) AC208708.3 141910 8863..9111 M (Escherichia coli) AC195239.3 178118 49903..50109 M (Escherichia coli) AC211141.5 193360 3784..4099 M (Escherichia coli) AC206952.3 166686 20127..20431 M (Escherichia coli) AC199888.4 133661 43229..43440 M (Escherichia coli) AC232231.2 121269 76315..77205 M (Escherichia coli) AC195546.3 196662 188158..188777 M (Escherichia coli) AC206063.3 191966 17355..17746 M (IS10) AC197521.4 181132 159476..159629 M (IS10) AC208446.4 211331 126920..127157 M (Escherichia coli) AC197716.3 185937 171444..171747 M (Escherichia coli) AC220972.3 173060 141302..141617 M (Escherichia coli) AC194819.3 191394 102059..102905 M (IS5) AC211894.3 166743 92723..93253 M (Escherichia coli) AC210620.3 240573 49842..50095 M (Escherichia coli) AC231399.4 192114 31031..31650 M (Escherichia coli) AC194929.3 144862 66259..66567 M (Escherichia coli) AC194098.3 117513 35868..36238 M (Escherichia coli) AC191618.2 143914 143364..143914 M (Escherichia coli) AC196061.2 228324 207468..207754 M (IS5) AC200106.4 140300 27196..27429 M (plasmid) AC204606.3 220878 43527..43770 M (Escherichia coli) AC186339.3 190386 24852..25199 M (Escherichia coli) AC207003.4 207452 173389..173624 M (Escherichia coli) AC191524.3 191740 9435..9967 M (Escherichia coli) AC197913.3 184604 8424..8553 M (IS2) AC216872.3 133228 21688..21974 M (Escherichia coli) AC188296.3 188301 174715..174923 M (IS10) AC206684.3 160488 117270..117421 M (Escherichia coli) AC217656.3 168565 130111..130160,135394..135486 M (vector) AC204395.3 174691 165801..166002 M (Escherichia coli) AC187482.4 138224 82622..83073 M (Escherichia coli) AC226552.4 114964 14241..14720 M (Escherichia coli) AC204606.3 220878 298..501 M (Escherichia coli) AC204584.3 135771 13149..13250 M (Escherichia coli) AC191279.3 91241 76373..76608 M (Escherichia coli) AC187884.4 129227 1874..2582 M (Escherichia coli) AC196145.3 160805 139589..139864 M (IS10) AC187097.3 184256 93977..94394 M (Escherichia coli) AC218041.3 209730 27636..27937 M (Escherichia coli) AC185431.4 186155 22091..22317 M (Escherichia coli) AC225161.3 40813 33373..33429,33449..33746 M (Escherichia coli) AC211895.3 146374 70424..70695 M (Escherichia coli) AC194448.3 188814 171270..171581 M (Escherichia coli) AC197777.3 228635 115063..115446 M (Escherichia coli) AC211525.3 169222 135007..135669 M (Escherichia coli) AC212585.3 200983 84926..85217 M (Escherichia coli) AC191271.2 211598 170311..170568 M (mitochondrion or Escherichia col) AC205349.3 178671 16758..16957 M (Escherichia coli) AC205853.3 161802 59273..59432 M (Escherichia coli) AC197919.3 183547 1..239 M (IS1) AC186306.3 177776 1..403 M (Escherichia coli) AC213351.4 204327 149020..149682 M (IS10) AC191787.3 136688 1..862 M (Escherichia coli) AC210255.3 179561 55984..56364 M (Escherichia coli) AC206616.3 142766 108624..108809 M (Escherichia coli) AC216188.3 217017 65592..65887 M (Escherichia coli) AC185413.3 133409 42826..43153 M (Escherichia coli) AC216876.3 145164 32279..32643 M (Escherichia coli) AC204868.3 222511 172607..173002 M (Escherichia coli) AC211696.4 166309 129982..130184 M (Escherichia coli) AC199488.4 180287 113265..113843 M (Escherichia coli) AC195942.2 159430 137732..137948 M (Escherichia coli) AC197560.2 228981 160629..160851 M (Escherichia coli) AC212041.3 219198 191046..191180 M (IS1) AC187475.4 123250 54754..55212 M (Escherichia coli) AC188010.3 201264 112486..113072 M (IS10) AC195969.1 136237 124239..124316 M (IS10) EF517601.1 960736 13791..13889 M (vector) AC203850.3 144690 128922..129013 M (Escherichia coli) AC211736.3 211514 51892..52197 M (Escherichia coli) AC207796.3 229746 146959..147119 M (vector) AC200412.3 184990 10952..11053,11154..11248 M (vector) AC211144.4 174803 144582..144849 M (Escherichia coli) AC202452.3 107719 76182..76351 M (Escherichia coli) AC217890.3 151834 18790..18958 M (IS186) AC212113.6 146501 56972..57260 M (vector) AC185228.4 225694 143195..143848 M (Escherichia coli) AC193577.3 124920 67352..67489 M (Escherichia coli or mitochondrio) AC216045.3 212112 81932..82232 M (Escherichia coli) AC212891.3 191532 1002..1136 M (Escherichia coli) AC199554.2 168748 79466..79822 M (Escherichia coli) AC215186.3 173323 42075..42353 M (Escherichia coli) AC204581.3 177696 15497..15882 M (Escherichia coli) AC203009.3 150062 42590..42727 M (Escherichia coli) AC195674.3 202811 65779..66189 M (Escherichia coli) AC192220.3 172923 1..105 M (IS5) AC198521.3 188420 65976..66157 M (Escherichia coli) AC214041.3 200427 39539..39655 M (Escherichia coli) AC204881.3 153950 46064..46334 M (Escherichia coli) AC199421.3 130869 28460..28742 M (Escherichia coli) AC199050.3 132693 39409..39744 M (Escherichia coli) AC235547.2 170756 28281..28488 M (Escherichia coli) AC198231.3 159132 51284..51418 M (Escherichia coli) AC200504.4 173898 169289..169408 M (Escherichia coli) AC194262.3 164948 26901..27156 M (Escherichia coli) AC191685.3 172907 86622..86918 M (Escherichia coli) AC212000.3 183012 42304..42498 M (Escherichia coli) AC216735.3 229196 103768..104097 M (Escherichia coli) AC202712.2 178920 6658..6951 M (Escherichia coli) AC209916.3 167902 66711..67077 M (Escherichia coli) AC211184.3 193203 78414..78550 M (Escherichia coli) AC207767.3 172558 128170..128400 M (Escherichia coli) AC211760.3 127575 2615..2771 M (Escherichia coli) AC212026.5 205517 24004..24144 M (Escherichia coli) AC190538.2 215784 157402..157806 M (Escherichia coli) AC206760.3 134487 72025..72405 M (Escherichia coli) AC177897.2 318006 65576..65794 M (vector) AC208417.3 183626 147331..147497 M (Escherichia coli) AC208364.3 127369 96964..97091 M (Escherichia coli) AC200050.4 199599 101685..101894 M (IS10) AC210949.4 184642 17881..18166 M (Escherichia coli) AC201959.4 183097 96119..96366 M (Escherichia coli) AC219096.3 130822 17447..17551 M (Escherichia coli) AC198662.3 204089 117268..117630 M (Escherichia coli) AC184871.2 187305 50492..50690 M (Escherichia coli) AC233967.3 183111 116565..116623 M (vector) AC177837.3 195496 99621..99688 M (vector) AC184790.3 211431 75797..75911 M (Escherichia coli) AC231755.2 174768 23220..23314 M (vector) AC205906.3 201765 152543..152622 M (Escherichia coli) AC207117.3 171398 160943..160995 M (Escherichia coli) AC184850.4 171881 33360..33417 M (vector) AC212569.4 176824 34091..34407 M (Escherichia coli) AC186569.4 155415 11589..11982 M (Escherichia coli) AC195333.3 111576 102280..102639 M (Escherichia coli) AC195347.4 189176 1..4207 X (mitochondrion) AC207637.3 123960 1..16149 X (mitochondrion) AC209365.3 216683 1..20221 X (mitochondrion) AC196279.3 234201 224069..231859 X (mitochondrion) AC204887.4 201685 1..10610 X (mitochondrion) AC209810.3 196493 1..18263 X (mitochondrion) AC207637.3 123960 21779..42004 X (mitochondrion) AC199189.4 164117 120759..164117 X (mitochondrion) AC209365.3 216683 105939..113076 X (mitochondrion) AC207637.3 123960 54272..97139 X (mitochondrion) AC208351.3 215806 213294..215806 X (Macaca mulatta) AC209424.3 202714 200329..202714 X (Macaca mulatta) AC226491.2 185509 7297..9728 M (Papio hamadryas) AC191015.2 199267 123353..123783 M (Bacillus cereus Q1) AC225983.1 164754 110850..111224 M (Homo sapiens) AC207533.3 161670 70053..70542 M (Pongo abelii) AC212879.3 184600 1..399 M (Pongo abelii) AC193503.3 177218 54987..55180 M (Pan troglodytes) AC194269.3 190879 131082..131257 M (Pan troglodytes)